microarray experiment design, setup, and data (Biotechnology Information)
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1) Product Images from "Integrated microarray and multiplex cytokine analyses of Kaposi's Sarcoma Associated Herpesvirus viral FLICE Inhibitory Protein K13 affected genes and cytokines in human blood vascular endothelial cells"
Article Title: Integrated microarray and multiplex cytokine analyses of Kaposi's Sarcoma Associated Herpesvirus viral FLICE Inhibitory Protein K13 affected genes and cytokines in human blood vascular endothelial cells
Journal: BMC Medical Genomics
doi: 10.1186/1755-8794-2-50
Figure Legend Snippet: Validation of gene expression array data by qRT-PCR and western blotting . (a) . Eleven genes were randomly picked and their relative mRNA levels in the mock- and 4OHT- treated vector and K13-ER TAM expressing HUVECs were examined using real-time RT-PCR. The two different methods, the microarrays and the RT-PCR, show excellent qualitative agreement. (b) . Linear regression analysis shows excellent correlation between the qRT-PCR and microarray data with a coefficient of variation (R 2 ) of 0.845. (c) . Western blot analysis confirms induction of COX-2/PTGS2 upon treatment of K13-ER TAM cells with 4OHT. Tubulin blot shows equal protein loading.
Techniques Used: Biomarker Discovery, Gene Expression, Quantitative RT-PCR, Western Blot, Plasmid Preparation, Expressing, Reverse Transcription Polymerase Chain Reaction, Microarray